基本信息
姓名：喻祖国
职称：教授
电子信箱：yuzg@xtu.edu.cn
个人简介
喻祖国，二级教授。1997年复旦大学数学系博士毕业， 1997年至1999年中国科学院理论物理研究所博士后，曾全职在澳大利亚从事研究工作6年（2000-2003，2005-2008）。现任BWIN必赢副董事长、“智能计算与信息处理”教育部重点实验室主任、统计学科负责人、湖南省第六届学位委员会委员、第八届湖南省督学、湖南省数理类专业教指委秘书长，是湖南省“芙蓉学者计划”特聘教授、国务院政府特殊津贴专家、教育部创新团队负责人、教育部“新世纪人才计划”人选, SCI期刊J. Nonlin. Math. Phys. (IF: 1.163 for 2021) 编委， SCI期刊Current Bioinformatics (IF: 4.850 for 2021, Q1)、Mathematics (IF: 2.592 for 2021, Q1) 的客座编委。先后获得中国高校科学技术二等奖、国家级教学成果二等奖1项（排名第6）、湖南省教学成果一等奖3项（分别排名第1、第2、第5）、湖南省自然科学二等奖2项（均排名第1）和湖南青年科技创新奖杰出奖（单独）等教学科研奖励；主持国家重大研发计划课题、国家自然科学基金项目6项、教育部创新团队项目、霍英东青年基金项目等的研究。多年来在Mol. Biol. Evol.、Brief. in Bioinform.、 Chaos Solitons & Fractals、Environ. Pollut.、Energy、Mol. Ecol. Res.、Bioinformatics、Fuzzy Sets and Systems、Mol. Phylogenet. Evol.、Chaos、J. Chem. Phys.、Phys. Rev. E等发表论文180余篇（其中SCI收录 140余篇；SSCI收录2篇，EI收录58篇）。
学习工作经历
教育经历：
1987.09-1991.07: BWIN必赢数学系本科生
1991.09-1994.07: BWIN必赢数学系硕士研究生
1994.09-1997.06: 复旦大学数学系博士生
工作经历：
1997.07-1999.06：中国科学院理论物理研究所博士后
1999.06-2002.08：BWIN必赢数学系副教授（其中1999.7-1999.12：中国科学院晨兴数学中心高级访问学者）
2002.08-至今：BWIN必赢教授(2002年湖南省破格评为教授，2004年2月评为博士生导师、湖南省 “121” 人才第三层次人选, 2008年任BWIN必赢“智能计算与信息处理”教育部重点实验室副主任、BWIN必赢校学术委员会委员、入选教育部新世纪计划、2010年获批湖南省“芙蓉学者计划”特聘教授、2012年被确认为湖南省首批二级教授、2013年获批首届享受湖南省政府特殊津贴专家，2018年获批享受国务院政府特殊津贴专家、湖南省 “121” 人才第二层次人选)，其中：
2014.01-2016.12: 澳大利亚昆士兰理工大学数学学院兼职教授(Adjunct professor)
2017.07-2020.06: 澳大利亚昆士兰理工大学电子工程与计算机科学学院兼职教授(Adjunct professor)
2000.03-2003.03, 2005.11-2008.5: 澳大利亚昆士兰理工大学数学学院全职研究人员(Research Fellow)
2003.12-2005.09：BWIN必赢国际交流处负责人
2011.08-2015.10: BWIN必赢数学与计算科学公司党委书记
2015.10-2021.02：BWIN必赢教务处处长
2021.02-至今： BWIN必赢副董事长
2007.11-2007.12、2008.05、2008.12、2010.01: 香港中文大学访问教授
2005.07: 美国佛罗里达中央大学访问教授
2007.07: 意大利维罗纳大学访问教授（讲授生物信息学博士生课程）
主讲课程
数学分析、高等数学、分形几何-数学基础、时间序列分析、生物统计、数学文化、生物信息学
研究方向
分形论及应用、时间序列分析、复杂网络分析、生物与环境数据处理
招生类别、专业及方向
博士和硕士：数学（函数论、分形几何及应用）、统计学（生物与环境数据统计）
科研项目
[1] 喻祖国，基于分形和复杂网络分析的物种亲缘树重构与miRNA-疾病关系预测方法研究,国家自然科学基金面上项目（项目编号：12371088)，2024.01-2027.12，主持人(直接费用：43.5万元)
[2] 喻祖国，以审判为中心的诉讼制度和多元化纠纷解决机制改革成效评估与优化技术研究, 国家重点研究计划项目“智慧司法科学理论与司法改革科技支撑技术研究”(项目编号：2020YFC0832400)之课题五 (项目编号：2020YFC0832405)，2021.1-2023.12，主持人 (直接费用：306万元)
[3] 喻祖国，分形时间序列和复杂网络的重分形分析及其在几个生物信息问题中的应用研究, 国家自然科学基金面上项目（编号：11871061)， 2019.1-2022.12，主持人 (53万元)
[4] 喻祖国，面向地方复杂疾病的ncRNA生物标志物挖掘新方法研究，湖南省重点领域研发计划-重点研发项目 (项目编号：2022WK2009)，2021.8.26- 2024.8.25，主持人 (直接费用：25万元)
[5] 喻祖国，由Sierpinski垫片得到的局部自相似网络上的随机游走及谱分析，国家自然科学基金天元项目（项目编号：12026213)， 2021.1-2021.12，主持人 (直接费用：20万元)
[6] 喻祖国，疾病基因下一代测序原始读长数据的纠错及压缩算法研究, 国家自然科学基金海外及港澳学者合作研究基金项目（编号：61828203)， 2019.1-2020.12，与悉尼科技大学李金艳教授联合，中方唯一负责人（18万元）
[7] 喻祖国，多重分形分析与统计方法在宏细观磁弹耦合网络与粘弹网络分析中的应用研究, 湖南省教育厅高校创新平台开放基金项目 (编号: 17K0901), 2017.9-2019.12，主持人 ( 6 万元)
[8] 喻祖国，分形及相关方法在分子进化与蛋白质研究中的应用, 国家自然科学基金面上项目（编号：11371016)， 2014.1-2017.12，主持人(62万元)
[9] 喻祖国，微分方程数值方法与生物计算，教育部“长江学者和创新团队发展计划”创新团队项目（编号： IRT1179）, 2012.1-2014.12, 主持人 (300万元)
[10] 喻祖国, 分形与分数微分方程在生物信息处理中的应用，湖南省教育厅重点项目 (编号：11A122) ， 2012-2014，主持人 (8万元)
[11] 喻祖国，分形及相关方法在时间序列分析与复杂网络研究中的应用，国家自然科学基金面上项目（编号： 11071282) 2011.1-2013.12, 主持人(30万元)
[12] 喻祖国，微分方程数值方法与信息处理, 湖南省“高校科技创新团队”项目，2011.1-2013.12, 主持人(50万元)
[13] 喻祖国，微分方程数值方法及应用, 湖南省自然科学基金创新群体 (编号:10JJ7001), 2011.1-2013.12 (骨干成员，主持人:黄云清)
[14] 喻祖国，并行高效自适应算法研究及在蛋白质折叠问题中的应用, 湖南省科技厅重点项目 (编号: 2011FJ2011), 2011.1-2013.12 (骨干成员，主持人:舒适)
[15] 喻祖国, Spatial and Temporal Analysis of the Spread of Avian Influenza, 香港政府研究基金（RGC Earmarked Research Grant）, 2010.1-2011.12 , 与香港中文大学梁怡教授、朱家豪教授联合，（排名第三）（68.32万港元）
[16] 喻祖国, 分形与小波方法在蛋白质问题研究中的应用，霍英东青年教师基金项目 (编号 101004)，2006.3-2009.3, 主持人 (1.7万美元)
[17] 喻祖国, 分形与小波方法研究蛋白质折叠与结构预测问题, 国家自然科学基金面上项目 ( 编号: 30570426)， 2006-2008，主持人. (28万元)
[18] 喻祖国, 分形与统计方法在蛋白质问题研究中的应用，湖南省教育厅青年基金项目 (编号：05B007)，2006-2008，主持人 (4.5万元)
[19] 喻祖国，Stochastic modeling of spatiotemporal nonlinear diffusion processes with multifractal characteristics. 澳大利亚国家科学研究基金项目 (ARC) ，2005-2009，No. DP0559807, 主要研究人员 (35.3万澳元)
[20] 喻祖国, 铀矿冶地域地下水中核素迁移不确定性理论与方法, 国家自然科学基金面上项目（编号: 10475038）， 2005-2007，参与
[21] 喻祖国， 非线性科学方法生命序列与金融序列分析中的应用，国家自然科学基金(青年基金)项目 (编号 10101022)， 2002-2004， 主持人 (7万元)
[22] 喻祖国，Multifractal and its application, 澳大利亚昆士兰理工大学博士后研究基金，2000- 2002，主持人 (1.5万澳元)
[23] 喻祖国， 非线性标度理论在DNA系列分析中的应用，中国博士后基金项目 (编号98B632)，1998-1999，主持人
[24] 喻祖国，Diffusion and transport of saltwater in coastal aquifers, 澳大利亚国家科学研究基金项目 (ARC) ，2003-2006，No. LP0348653, 主要研究人员
[25] 喻祖国，Stochastic analysis of long-range dependent multifractals, 澳大利亚国家科学研究基金项目 (ARC) ，2000-2002，No. A10024117, 主要研究人员
发表论文
[1] Runbin Tang, Zuguo Yu*, Jinyan Li*, (2023) KINN: An alignment-free accurate phylogeny reconstruction method based on inner distance distributions of k-mer pairs in biological sequences, Mol. Phylogenet. Evol., 179: 107662, https://doi.org/10.1016/j.ympev.2022.107662 (SCI) (影响因子: 5.019 for 2021, 4.1 for 2022) JCR一区、中科院生物学大类一区TOP期刊
[2] Ya-Ping Wen and Zu-Guo Yu*, (2023) Identifying shared genetic loci and common risk genes of rheumatoid arthritis associated with three autoimmune diseases based on large-scale cross-trait Genome-wide Association Studies, Frontiers in Immunology, 14: 1160397. doi: https://doi.org/ 10.3389/fimmu.2023.1160397 (SCI) (影响因子: 8.786 for 2021, 7.3 for 2022) JCR一区期刊、中科院医学大类二区TOP期刊
[3] Jian-Hui Li, Zu-Guo Yu*, Vo Anh, Jin-Long Liu, An-Qi Peng, (2023) A new random rewiring method to transform fractal networks into small-world networks, Fractals, 31(7): 2350089. https://doi.org/10.1142/S0218348X23500895 (SCI) (影响因子: 4.7 for 2022) 中科院数学大类一区期刊（TOP期刊），中信所、JCR一区期刊
[4] Xuan Lin, Lichang Dai, Yafang Zhou, Zu-Guo Yu, Wen Zhang, Jian-Yu Shi, Dong-Sheng Cao, Li Zeng, Haowen Chen*, Bosheng Song*, Philip S. Yu and Xiangxiang Zeng, (2023) Comprehensive evaluation of deep and graph learning on drug-drug interactions prediction, Briefings in Bioinformatics, 24(4):1-20, https://doi.org/10.1093/bib/bbad235 (SCI) (影响因子: 13.994 for 2021, 9.5 for 2022) JCR一区期刊、中科院二区期刊
[5] Xian-hua Xie*,Yu-jie Huang, Guo-sheng Han, Zu-Guo Yu and Yuan-lin Ma, (2023) Microbial Characterization Based on Multifractal Analysis of Metagenomes. Frontiers in Cellular and Infection Microbiology, 13:1117421. https://doi.org/10.3389/fcimb.2023.1117421 (SCI) (影响因子: 5.7 for 2022) JCR一区、中科院医学大类二区期刊
[6] Yuan-Lin Ma, Dong-Ling Yu, Ya-Fei Liu and Zu-Guo Yu*, (2023) CCRMDA: MiRNA-disease association prediction based on cascade combination recommendation method on heterogeneous network, Current Bioinformatics, 18(4): 310-319, https://doi.org/10.2174/ 1574893618666230222124311 (SCI) (影响因子: 4.0 for 2022) JCR一区期刊(Mathematical & Computational Biology Q1)
[7] Li Zeng, Yang Liu, Zu-Guo Yu*, Yuan-Sheng Liu*, (2022) iEnhancer-DRLA: identification of enhancers and their strengths by a self-attention fusion strategy for local and global features, Briefings in Functional Genomics, 21(5), 399–407, (SCI) (影响因子: 4.0 for 2022) JCR一区期刊
[8] Dong-Ling Yu, Zu-Guo Yu*, (2022) WHVoteRank: a network-based voting approach for identifying coding and non-coding cancer drivers, Mathematics, 10(5):801, (SCI) (影响因子: 2.4 for 2022) JCR 一区、中科院数学大类二区期刊
[9] Elham Hormozi, Shuwen Hu, Zhe Ding, Yu-Chu Tian, You-Gan Wang, Zu-Guo Yu, Weizhe Zhang, (2022) Energy-Efficient Virtual Machine Placement in Data Centres via Accelerated Genetic Algorithm with Improved Fitness Computation, Energy, 252, 123884 (SCI) (影响因子: 9.0 for 2022) 中科院工程技术大类一区期刊（TOP期刊），JCR一区期刊
[10] Runbin Tang, Zuguo Yu*, Yuanlin Ma, Yaoqun Wu, Yi-Ping Phoebe Chen, Limsoon Wong and Jinyan Li*, (2021) Genetic source completeness of HIV-1 circulating recombinant forms (CRFs) predicted by multi-label learning, Bioinformatics. 37(6): 750-758. (SCI) (影响因子: 6.931 for 2021, 5.8 for 2022) JCR一区期刊,中科院数学与计算生物学一区，生物类TOP期刊
[11] Lu Huo, Jiao Jiao Li, Ling Chen, Zuguo Yu, Gyorgy Hutvagner and Jinyan Li*, (2021) Single-cell multi-omics sequencing: application trends, COVID-19, data analysis issues and prospects, Briefings in Bioinformatics, 22(6): 1-19. (SCI) (影响因子: 13.994 for 2021, 9.5 for 2022) JCR一区期刊,中科院生物大类一区、生物类TOP期刊
[12] Shan Jiang, Zu-Guo Yu, Vo V. Anh, Yu Zhou*，(2021) Long- and short-term time series forecasting of air quality by a multi-scale framework, Environmental Pollution, 271: 116381. (SCI) (影响因子: 9.988 for 2021, 8.9 for 2022) 中科院环境科学与生态学大类一区期刊（TOP期刊），JCR一区期刊
[13] Dong-Ling Yu, Zu-Guo Yu*, Guo-Sheng Han, Jinyan Li* and Vo Anh, （2021）Heterogeneous types of miRNA-disease associations stratified by multi-layer network embedding and prediction, Biomedicines, 9: 1152, (SCI) (影响因子: 6.081 for 2020, 4.7 for 2022) JCR一区期刊,中科院药学一区，药学类TOP期刊
[14] Shan Jiang，Zu-Guo Yu*，Vo V. Anh and Yu Zhou*，(2021) Multifractal temporally weighted detrended cross-correlation analysis of PM10, NOX and meteorological factors in urban and rural areas of Hong Kong，Fractals, 9(6): 2150166. (SCI) (影响因子: 4.7 for 2022) 中科院数学大类一区期刊,TOP期刊，JCR一区期刊
[15] Yao-Qun Wu, Zu-Guo Yu*, Run-Bin Tang, Guo-Sheng Han and Vo V. Anh, (2021) An information-entropy position-weighted k-mer relative measure for whole genome phylogeny reconstruction. Frontiers in Genetics, 12: 766496 (SCI) (影响因子: 3.7 for 2022) JCR一区期刊
[16] Pan Wang, Guiyang Zhang, Zu-Guo Yu, Guohua Huang*, (2021) A Deep Learning and XGBoost-based Method for Predicting Protein- protein Interaction Sites, Frontiers in Genetics, 12:752732. (SCI) (影响因子: 3.7 for 2022) JCR一区期刊
[17] Xuan Zhang, Yuansheng Liu, Zuguo Yu, Michael Blumenstein, Gyorgy Hutvagner and Jinyan Li*, (2021) Instance-based error correction for short reads of disease-associated genes. BMC Bioinformatics, 22 (Suppl 6): 142, (SCI)(影响因子: 3.0 for 2022) JCR二区期刊，中科院数学与计算生物学小类二区期刊
[18] Yuemin Ding, Jin-Long Liu (联合第一作者), Xiaohui Li, Yu-Chu Tian* and Zu-Guo Yu*, (2021) Computationally efficient sandbox algorithm for multifractal analysis of large-scale complex networks with tens of millions of nodes. Phys. Rev. E, 103: 043303. (SCI) (影响因子: 2.4 for 2022) JCR一区期刊, 中科院数学物理类二区期刊
[19] Jin-Long Liu, Zu-Guo Yu, Yee Leung, Tung Fung, and Yu Zhou*, (2020) Fractal and multifractal analyses of recurrence networks constructed from the two-dimensional fractional Brownian motions, Chaos, 30: 113123 (SCI) (影响因子: 3.741 for 2021) JCR一区期刊, 中科院二区期刊 (TOP 期刊)
[20]. Shan Jiang, Bao-Gen Li, Zu-Guo Yu*, Fang Wang, Vo V. Anh, Yu Zhou, (2020) Multifractal Temporally Weighted Detrended Cross-correlation Analysis of Multivariate Time Series, Chaos 30(2): 023134. (SCI) (影响因子: 3.741 for 2021) JCR一区期刊, 中科院二区期刊(TOP 期刊)
[21]. Hongping Guo, Jiyuan An, Zuguo Yu*, (2020) Identifying shared risk genes for asthma, hay fever, and eczema by multi-trait and multiomic association analyses, Frontiers in Genetics, 11:270. (SCI) (影响因子: 4.772 for 2021) JCR一区期刊
[22]. Yuansheng Liu, Zuguo Yu, Marcel Dinger and Jinyan Li, (2019) Index suffix-prefix overlaps by (w, k)-minimizer to generate long contigs for reads compression, Bioinformatics, 35(12): 2066–2074. (SCI) (影响因子: 6.931 for 2021) JCR一区期刊,中科院数学与计算生物学一区，生物类TOP期刊
[23]. Dong-Ling Yu, Yuan-Lin Ma (joint first authors) and Zu-Guo Yu*, (2019) Inferring microRNA-disease association by hybrid recommendation algorithm and unbalanced bi-random walk on heterogeneous network, Scientific Reports, 9:2474 (影响因子: 4.996 for 2021) JCR一区期刊
[24].Jin-Long Liu, Zu-Guo Yu* and Vo Anh, (2019) Multifractal analysis for core-periphery structure of complex networks, J. Stat. Mech.: Theor. Exp., 2019: 073405. (SCI) (影响因子: 2.234 for 2021) JCR二区期刊
[25]. Yuanlin Ma, Zuguo Yu*, Guosheng Han, Jinyan Li and Vo Anh, (2018) Identification of pre-microRNAs by characterizing their sequence order evolution information and secondary structure graphs, BMC Bioinformatics , 19(Suppl 19):521. (SCI)(影响因子: 3.307 for 2021) JCR二区期刊，中科院数学与计算生物学小类二区期刊
[26]. Hai-Long Zou, Zu-Guo Yu*, Vo Anh, and Yuan-Lin Ma, (2018), From standard α-stable Levy motions to horizontal visibility networks: Dependence of multifractal and Laplacian spectrum, J. Stat. Mech.: Theor. Exp., 2018: 053403 (SCI) (影响因子: 2.234 for 2021) JCR二区期刊
[27]. Yun-Lan Wei, Zu-Guo Yu*, Hai-Long Zou and Vo Anh, (2017) Multifractal temporally weighted detrended cross-correlation analysis to quantify power-law cross-correlation and its application to stock markets, Chaos 27: 063111 (SCI) (影响因子: 3.741 for 2021) JCR一区期刊, 中科院二区期刊(TOP 期刊)
[28]. Qi Wu, Zu-Guo Yu* and Jianyi Yang*, (2017) DLTree: efficient and accurate phylogeny reconstruction using the dynamical language method, Bioinformatics, 33(14): 2214–2215 (SCI) (影响因子: 6.931 for 2021) 中科院、JCR一区期刊，生物类TOP期刊。
[29]. Changhe Fu*, Su Deng, Guangxu Jin, Xinxin Wang and Zu-Guo Yu*, (2017) Bayesian network model for identification of pathways by integrating protein interaction with genetic interaction data, BMC Systems Biology, 11(Suppl 4): 81. (SCI) (影响因子: 3.706 for 2020) 中科院、JCR 二区期刊
[30]. Jin-Long Liu, Jian Wang, Zu-Guo Yu* and Xian-Hua Xie，(2017) Fractal and multifractal analyses of bipartite networks, Scientific Reports 7:45588 (SCI) (影响因子: 4.996 for 2021) JCR一区期刊
[31]. Da-Wen Huang and Zu-Guo Yu*, (2017) Dynamic-Sensitive centrality of nodes in temporal networks, Scientific Reports 7: 41454. (SCI) (影响因子: 4.996 for 2021) JCR一区期刊
[32]. Zu-Guo Yu*, Huan Zhang, Da-Wen Huang, Yong Lin and Vo Anh, (2016) , Multifractality and Laplace spectrum of horizontal visibility graphs constructed from fractional Brownian motions, J. Stat. Mech.: Theor. Exp., 2016: 033206, (SCI) (影响因子: 2.234 for 2021) JCR二区期刊
[33]. Wei-Feng Yang, Zu-Guo Yu*, Vo Anh, (2016), Whole proteome based phylogeny reconstruction for prokaryotes using higher order Markov model and chaos game representation, Mol. Phylogenet. Evol. 96: 102-111, (SCI) (影响因子: 5.019 for 2021) JCR一区、中科院生物学类一区期刊(TOP期刊)
[34]. Yu-Qin Song, Jin-Long Liu (Joint first author), Zu-Guo Yu*, and Bao-Gen Li, (2015), Multifractal analysis of weighted networks by a modified sandbox algorithm, Scientific Reports 5:17628 (SCI) (影响因子: 4.996 for 2021) JCR一区期刊
[35]. Jin-Long Liu, Zu-Guo Yu*, and Vo Anh，(2015). Determination of multifractal dimensions of complex networks by means of the sandbox algorithm. Chaos 25(2): 023103, (SCI) (影响因子: 3.741 for 2021) JCR一区期刊, 中科院二区期刊(TOP 期刊)
[36]. Xian-Hua Xie, Zu-Guo Yu*, Guo-Sheng Han, Wei-Feng Yang, Vo Anh, (2015), Whole-proteome based phylogenetic tree construction with inter-amino-acid distances and the conditional geometric distribution profiles, Mol. Phylogenet. Evol. 89: 37-45. (SCI) (影响因子: 5.019 for 2021) JCR一区、中科院生物学类一区期刊(TOP期刊)
[37]. Zu-Guo Yu*, Vo Anh and Richard Eastes, (2014), Underlying scaling relationships between solar activity and geomagnetic activity revealed by multifractal analyses, J. Geophys. Res.:Space Physics, 119: 7577-7586, (SCI) (影响因子: 3.318 for 2015, 3.111 for 2021) 为2009年地学类TOP20之第15.中科院、JCR二区期刊，地球科学类TOP期刊
[38]. Long Fan, Jerome H.L. Hui, Zu Guo Yu, Ka Hou Chu, (2014), VIP Barcoding: composition vector-based software for rapid species identification based on DNA barcoding, Mol. Ecol. Res., 14(4):871-881. (SCI) (影响因子: 8.678 for 2021) 中科院、JCR一区期刊,生物大类TOP期刊
[39]. Jin-Long Liu, Zu-Guo Yu* and Vo Anh, (2014) Topological properties and multifractal analysis of recurrence network constructed from fractional Brownian motions. Phys. Rev. E, 89: 032814. (SCI,EI) (影响因子: 2.707 for 2021) JCR一区期刊
[40]. Guo-Sheng Han, Zu-Guo Yu* and Vo Anh, (2014) A two-stage SVM method to predict membrane protein types by incorporating amino acid classifications and physicochemical properties into a general form of Chou's PseAAC, J. Theor. Biol. 344:31-39. (SCI) (影响因子: 2.405 for 2021)
[41]. Bao-Gen Li, Zu-Guo Yu* and Yu Zhou, (2014), Fractal and multifractal properties of a family of fractal networks, J. Stat. Mech.: Theor. Exp., 2014: P02020. (SCI)(影响因子: 2.234 for 2021) JCR一区期刊
[42]. Long Shi, Zu-Guo Yu*, Hai-lan Huang, Zhi Mao and Ai-guo Xiao, (2014), The subordinated processes controlled by a family of subordinators and corresponding Fokker-Planck type equations, J. Stat. Mech.: Theor. Exp., 2014: P12002. (SCI) (影响因子: 2.234 for 2021) JCR二区期刊
[43]. Guo-Sheng Han, Zu-Guo Yu*, Vo Anh, Anaththa P.D. Krishnajith and Yu-Chu Tian, (2013) An ensemble method for predicting subnuclear localizations from primary protein sequences based on amino acid classifications and physicochemical properties, PLoS One, 8(2):e57225. (SCI) (影响因子: 4.411 for 2010, 3.752 for 2021). JCR一区期刊
[44]. ChiPang Li; ZuGuo Yu (joint first author); GuoSheng Han; KaHou Chu, (2012) Analyzing Multi-locus Plant Barcoding Datasets with a Composition Vector Method based on Adjustable Weighted Distance, PLoS One ,7(7): e42154. (SCI) (影响因子: 4.411 for 2010, 3.752 for 2021). JCR一区期刊
[45]. Erjia Ge, Robert Haining, Chi Pang Li, Zuguo Yu, Miu Yee Waye, Ka Hou Chu, Yee Leung, (2012) Using Knowledge Fusion to Analyze Avian Influenza H5N1 in East and Southeast Asia. PLoS One 7(5):e29617. (SCI) (影响因子: 4.411 for 2010, 3.752 for 2021). JCR一区期刊
[46]. Y. Leung, E.J. Ge, Z.G. Yu, (2011) Temporal Scaling Behavior of Avian Influenza A (H5N1) -- The Multifractal Detrended Fluctuation Analysis, Annals of the American Association of Geographers 101(6),1221-1240. (SSCI) (影响因子: 3.982 for 2021) JCR一区期刊
[47]. Zu-Guo Yu, Ka Hou Chu, Chi Pang Li, Vo Anh, Li-Qian Zhou and R.W. Wang, (2010), Whole-proteome phylogeny of large dsDNA viruses and parvoviruses through a composition vector method related to dynamical language model, BMC Evol. Biol., 10:192 (SCI) (影响因子: 4.447 for 2005, 3.436 for 2021) JCR二区期刊
[48]. Zu-Guo Yu, Vo Anh, Yang Wang, Dong Mao and James Wanliss, (2010), Modeling and simulation of the horizontal component of the geomagnetic field by fractional stochastic differential equations in conjunction with empirical mode decomposition, J. Geophys. Res. 115: A10219, (SCI) (影响因子: 3.318 for 2015, 3.111 for 2021) 为2009年地学类TOP20之第15. 中科院、JCR二区期刊，地球科学类TOP期刊
[49]. Zu-Guo Yu*, Xiao-Wen Zhan, Guo-Shen Han, Roger W. Wang, Vo Anh and Ka Hou Chu, (2010) Proper distance metrices for phylogenetic analysis using complete genomes without sequence alignment, Int. J. Mol. Sci. 11:1141-1154 (SCI) (影响因子: 6.208 for 2021) JCR一区期刊, 中科院生物大类二区期刊，TOP期刊
[50]. Qiang Zhang, Zu-guo Yu, Chong-yu Xu, Vo Anh, Yee Leung, Yongqin Chen, (2010), Multifractal analysis of measure representation of flood/drought grade series in the Yangtze Delta, China, during the past millennium and their fractal model simulation, Int. J. Climatol., 30(3):450-457 (SCI, EI) (影响因子: 3.651 for 2021) JCR一区期刊
[51]. Zu-Guo Yu*, Vo Anh and Richard Eastes, (2009), Multifractal analysis of geomagnetic storm and solar flare indices and their class dependence, J. Geophys. Res. 114：A05214, (SCI) (影响因子: 3.318 for 2015, 3.111 for 2021) 为2009年地学类TOP20之第15. 中科院、JCR二区期刊，地球科学类TOP期刊
[52] Jian-Yi Yang, Zu-Guo Yu* and Vo Anh (2009), Clustering structures of large proteins using multifractal analyses based on 6-letter model and hydrophobicity scale of amino acids, Chaos, Solitons and Fractals 40:607-620. (SCI, EI) (影响因子: 9.922 for 2021) JCR一区期刊, 中科院数学物理一区期刊，top期刊
[53]. Jian-Yi Yang, Zhen-Ling Peng, Zu-Guo Yu, Rui-Jie Zhang, Vo Anh and Desheng Wang, (2009) Prediction of protein structural classes by recurrence quantification analysis based on chaos game representation, J. Theor. Biol. 257:618-626. (SCI) (影响因子: 2.405 for 2021).
[54]. Jian-Yi Yang, Yu Zhou, Zu-Guo Yu*，Vo Anh and Li-Qian Zhou, (2008), Human Pol II promoter recognition based on primary sequences and free energy of dinucleotides, BMC Bioinformatics, 9(1):113. (SCI)(影响因子: 4.958 for 2005, 3.307 for 2021) JCR一区期刊.
[55]. V.V. Anh, J.M. Yong and Z.G. Yu, (2008), Stochastic modeling of the auroral electrojet index, J. Geophys. Res. 113, A10215, (SCI) (影响因子: 3.318 for 2015, 3.111 for 2021) 为2009年地学类TOP20之第15. 中科院、JCR二区期刊，地球科学类TOP期刊
[56]. Jian-Yi Yang, Zu-Guo Yu* and Vo Anh (2007), Correlations between designability and various structural characteristics of protein lattice models, J. Chem. Phys. 126(19): 195101. (SCI, EI) (影响因子: 4.304 for 2021) 为2009年物理类TOP19之第18 JCR一区期刊
[57] Z.G. Yu, V.V. Anh*, J.A. Wanliss and S.M. Watson (2007), Chaos game representation of the Dst index and prediction of geomagnetic storm events, Chaos, Solitons and Fractals 31(3): 736-746. (SCI, EI) (影响因子: 9.922 for 2021) JCR一区期刊, 中科院数学物理一区期刊，top期刊
[58]. Z.G. Yu*, V.V. Anh, K.S. Lau and L.Q. Zhou (2006), Clustering of protein structures using hydrophobic free energy and solvent accessibility of proteins, Phys. Rev. E. 73: 031920. (SCI, EI) (影响因子: 2.707 for 2021) JCR一区期刊
[59]. Z.G. Yu*, L.Q. Zhou, V. V. Anh, K.H. Chu, S.C. Long and J.Q. Deng (2005), Phylogeny of prokaryotes and chloroplasts revealed by a simple composition approach on all protein sequences from whole genome without sequence alignment, J. Mol. Evol. 60: 538-545. (SCI)(影响因子: 3.973 for 2021)
[60]. Li-Qian Zhou, Zu-Guo Yu*, Ji-Qing Deng, Vo Anh and Shun-Chao Long (2005), A fractal method to distinguish coding and noncoding sequences in a complete genome based on a number sequence representation, J. Theor. Biol. 232: 559-567.(SCI) (影响因子: 2.405 for 2021).
[61]. Zu-Guo Yu*, Vo Anh and Ka-Sing Lau (2004), Chaos game representation of protein sequences based on the detailed HP model and their multifractal and correlation analyses, J. Theor. Biol. 226(3): 341-348. (SCI) (影响因子: 2.405 for 2021).
[62]. Zu-Guo Yu* (2004), Fourier transform and Mean quadratic variation of Bernoulli convolution on homogeneous Cantor set, Chaos, Solitons and Fractals, 21: 151-157. (SCI, EI) (影响因子: 9.922 for 2021) JCR一区期刊, 中科院数学物理一区期刊，top期刊
[63]. Ninghu Su, Zu-Guo Yu, Vo Anh and Kiran Bajracharya (2004), Fractal tidal waves induced anthropogenically in coastal aquifers,Queensland, Australia, Environ. Modell. Softw. 19: 1125-1130. (SCI, EI) (影响因子: 4.552 for 2018) JCR一区期刊,中科院计算机跨学科应用类一区期刊
[64]. Ka Hou Chu, Ji Qi, Zu-Guo Yu and Vo Anh (2004), Origin and phylogeny of chloroplasts: A simple correlation analysis of complete genomes. Mol. Biol. Evol. 21(1): 200-206. (SCI) (影响因子: 16.240 for 2020) 中科院、JCR一区期刊，TOP期刊
[65]. Zu-Guo Yu*, Vo Anh and Ka-Sing Lau (2003), Multifractal and correlation analysis of protein sequences from complete genome, Phys. Rev. E. 68: 021913. (SCI, EI) (影响因子: 2.707 for 2021) JCR一区期刊
[66]. V.V. Anh, K.S. Lau and Z.G. Yu* (2002), Recognition of an organism from fragments of its complete genome, Phys. Rev. E 66: 031910. (SCI, EI) (影响因子: 2.707 for 2021) JCR一区期刊
[67]. Zu-Guo Yu*, Vo Anh and Ka-Sing Lau (2001), Measure representation and multifractal analysis of complete genome, Phys. Rev. E 64: 031903. (SCI, EI)(影响因子: 2.707 for 2021) JCR一区期刊
[68]. Zu-Guo Yu*, Vo Anh and Bin Wang (2001), Correlation property of length sequences based on global structure of complete genome, Phys. Rev. E 63: 011903 (SCI, EI) (影响因子: 2.707 for 2021) JCR一区期刊
[69]. Zu-Guo Yu* and Bin Wang (2001), A time series model of CDS sequences on complete genome, Chaos, Solitons and Fractals 12(3): 519-526. (SCI, EI) (影响因子: 9.922 for 2021) JCR一区期刊, 中科院数学物理一区期刊，top期刊
[70]. Zu-Guo Yu* and Vo Anh (2001), Time series model based on global structure of complete genome, Chaos, Solitons and Fractals 12(10) 1827-1834. (SCI, EI) (影响因子: 9.922 for 2021) JCR一区期刊, 中科院数学物理一区期刊，top期刊
[71]. Zu-guo Yu* (2001), Fuzzy L languages, Fuzzy sets and Systems 117(2): 159-163. (SCI, EI) (影响因子: 3.343 for 2020) 中科院、JCR一区期刊，TOP期刊
[72]. Bin Wang and Zu-Guo Yu (2000), One way to characterize the compact structures of lattice protein model, J. Chem. Phys. 112(13): 6084-6088. (SCI, EI) (影响因子: 4.304 for 2021) 为2009年物理类TOP19之第18 JCR一区期刊